ENSPMRP00000007308 protein (Podarcis muralis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPMRP00000007308

LOW QUALITY PROTEIN: centromere protein J-like. (733 aa)

Predicted Functional Partners:

ITSN2

0.997

STIL

0.962

SASS6

0.934

ITSN1

0.918

ENSPMRP00000032073

0.918

PLK4

0.881

GAK

0.865

CDK5RAP2

0.762

ENSPMRP00000012211

0.753

AP2A1

0.729

Your Current Organism:

Podarcis muralis

NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP2A1	ENSPMRP00000007308	ENSPMRP00000022188	ENSPMRP00000007308	AP-2 complex subunit alpha-1 isoform X1.	LOW QUALITY PROTEIN: centromere protein J-like.	0.729
AP2A1	ENSPMRP00000032073	ENSPMRP00000022188	ENSPMRP00000032073	AP-2 complex subunit alpha-1 isoform X1.	annotation not available	0.983
AP2A1	GAK	ENSPMRP00000022188	ENSPMRP00000029694	AP-2 complex subunit alpha-1 isoform X1.	Cyclin-G-associated kinase isoform X1.	0.994
AP2A1	ITSN1	ENSPMRP00000022188	ENSPMRP00000031502	AP-2 complex subunit alpha-1 isoform X1.	Intersectin-1 isoform X1.	0.983
AP2A1	ITSN2	ENSPMRP00000022188	ENSPMRP00000009323	AP-2 complex subunit alpha-1 isoform X1.	Intersectin-2 isoform X1.	0.987
CDK5RAP2	ENSPMRP00000007308	ENSPMRP00000025856	ENSPMRP00000007308	CDK5 regulatory subunit associated protein 2.	LOW QUALITY PROTEIN: centromere protein J-like.	0.762
CDK5RAP2	ENSPMRP00000012211	ENSPMRP00000025856	ENSPMRP00000012211	CDK5 regulatory subunit associated protein 2.	annotation not available	0.533
CDK5RAP2	PLK4	ENSPMRP00000025856	ENSPMRP00000012370	CDK5 regulatory subunit associated protein 2.	Serine/threonine-protein kinase PLK4 isoform X1.	0.668
CDK5RAP2	SASS6	ENSPMRP00000025856	ENSPMRP00000016484	CDK5 regulatory subunit associated protein 2.	Spindle assembly abnormal protein 6 homolog isoform X1.	0.588
ENSPMRP00000007308	AP2A1	ENSPMRP00000007308	ENSPMRP00000022188	LOW QUALITY PROTEIN: centromere protein J-like.	AP-2 complex subunit alpha-1 isoform X1.	0.729
ENSPMRP00000007308	CDK5RAP2	ENSPMRP00000007308	ENSPMRP00000025856	LOW QUALITY PROTEIN: centromere protein J-like.	CDK5 regulatory subunit associated protein 2.	0.762
ENSPMRP00000007308	ENSPMRP00000012211	ENSPMRP00000007308	ENSPMRP00000012211	LOW QUALITY PROTEIN: centromere protein J-like.	annotation not available	0.753
ENSPMRP00000007308	ENSPMRP00000032073	ENSPMRP00000007308	ENSPMRP00000032073	LOW QUALITY PROTEIN: centromere protein J-like.	annotation not available	0.918
ENSPMRP00000007308	GAK	ENSPMRP00000007308	ENSPMRP00000029694	LOW QUALITY PROTEIN: centromere protein J-like.	Cyclin-G-associated kinase isoform X1.	0.865
ENSPMRP00000007308	ITSN1	ENSPMRP00000007308	ENSPMRP00000031502	LOW QUALITY PROTEIN: centromere protein J-like.	Intersectin-1 isoform X1.	0.918
ENSPMRP00000007308	ITSN2	ENSPMRP00000007308	ENSPMRP00000009323	LOW QUALITY PROTEIN: centromere protein J-like.	Intersectin-2 isoform X1.	0.997
ENSPMRP00000007308	PLK4	ENSPMRP00000007308	ENSPMRP00000012370	LOW QUALITY PROTEIN: centromere protein J-like.	Serine/threonine-protein kinase PLK4 isoform X1.	0.881
ENSPMRP00000007308	SASS6	ENSPMRP00000007308	ENSPMRP00000016484	LOW QUALITY PROTEIN: centromere protein J-like.	Spindle assembly abnormal protein 6 homolog isoform X1.	0.934
ENSPMRP00000007308	STIL	ENSPMRP00000007308	ENSPMRP00000011587	LOW QUALITY PROTEIN: centromere protein J-like.	SCL-interrupting locus protein isoform X1.	0.962
ENSPMRP00000012211	CDK5RAP2	ENSPMRP00000012211	ENSPMRP00000025856	annotation not available	CDK5 regulatory subunit associated protein 2.	0.533