STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLGALT1Procollagen galactosyltransferase 1 isoform X1. (675 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
0.959
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X1.
   
0.955
PLOD3
LOW QUALITY PROTEIN: multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3.
   
0.955
COLGALT2
Procollagen galactosyltransferase 2 isoform X1.
  
  
 
0.902
COL6A2
Collagen alpha-2(VI) chain isoform X1.
   
 0.537
ENSPMRP00000005450
annotation not available
    
 0.508
OGFOD2
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform X1.
   
 0.432
COL8A1
Collagen alpha-1(VIII) chain isoform X1.
    
  0.423
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.