STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4CCharged multivesicular body protein 4c. (218 aa)    
Predicted Functional Partners:
PDCD6IP
Programmed cell death 6-interacting protein isoform X1.
   
 0.992
CHMP7
Charged multivesicular body protein 7.
    
 0.989
LOC114583683
Charged multivesicular body protein 3.
   
 0.973
CHMP2A
Charged multivesicular body protein 2a isoform X1.
   
 0.969
CHMP5
Charged multivesicular body protein 5.
  
0.946
IST1
Vacuolar protein sorting-associated protein IST1.
    
 0.932
UEVLD
Ubiquitin-conjugating enzyme E2 variant 3 isoform X1.
   
 0.928
VPS4B
Vacuolar protein sorting-associated protein 4B.
    
 0.927
VPS4A
Vacuolar protein sorting-associated protein 4A isoform X1.
    
 0.927
SNF8
Vacuolar-sorting protein SNF8 isoform X1.
    
 0.921
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.