Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARNT | SIM1 | ENSPMRP00000032333 | ENSPMRP00000011483 | Aryl hydrocarbon receptor nuclear translocator isoform X1. | Single-minded homolog 1 isoform X1. | 0.785 |
ARNT2 | SIM1 | ENSPMRP00000029040 | ENSPMRP00000011483 | Aryl hydrocarbon receptor nuclear translocator 2 isoform X1. | Single-minded homolog 1 isoform X1. | 0.834 |
OTP | SIM1 | ENSPMRP00000026122 | ENSPMRP00000011483 | Homeobox protein orthopedia. | Single-minded homolog 1 isoform X1. | 0.664 |
RNF111 | SIM1 | ENSPMRP00000036257 | ENSPMRP00000011483 | E3 ubiquitin-protein ligase Arkadia isoform X1. | Single-minded homolog 1 isoform X1. | 0.431 |
RNF44 | SIM1 | ENSPMRP00000011841 | ENSPMRP00000011483 | E3 ubiquitin-protein ligase RNF38/44. | Single-minded homolog 1 isoform X1. | 0.448 |
SIM1 | ARNT | ENSPMRP00000011483 | ENSPMRP00000032333 | Single-minded homolog 1 isoform X1. | Aryl hydrocarbon receptor nuclear translocator isoform X1. | 0.785 |
SIM1 | ARNT2 | ENSPMRP00000011483 | ENSPMRP00000029040 | Single-minded homolog 1 isoform X1. | Aryl hydrocarbon receptor nuclear translocator 2 isoform X1. | 0.834 |
SIM1 | OTP | ENSPMRP00000011483 | ENSPMRP00000026122 | Single-minded homolog 1 isoform X1. | Homeobox protein orthopedia. | 0.664 |
SIM1 | RNF111 | ENSPMRP00000011483 | ENSPMRP00000036257 | Single-minded homolog 1 isoform X1. | E3 ubiquitin-protein ligase Arkadia isoform X1. | 0.431 |
SIM1 | RNF44 | ENSPMRP00000011483 | ENSPMRP00000011841 | Single-minded homolog 1 isoform X1. | E3 ubiquitin-protein ligase RNF38/44. | 0.448 |