NCMAP protein (Podarcis muralis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

NCMAP

Noncompact myelin-associated protein isoform X1. (85 aa)

Predicted Functional Partners:

RANBP2

0.969

ENSPMRP00000006590

0.880

RBM25

0.880

UPF2

0.879

SNRNP48

0.862

SRRM2

0.862

PRPF38A

0.857

WBP11

0.855

PNN

0.848

NCBP1

0.847

Your Current Organism:

Podarcis muralis

NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMRP00000006590	NCBP1	ENSPMRP00000006590	ENSPMRP00000033458	annotation not available	Nuclear cap-binding protein subunit 1 isoform X1.	0.921
ENSPMRP00000006590	NCMAP	ENSPMRP00000006590	ENSPMRP00000012629	annotation not available	Noncompact myelin-associated protein isoform X1.	0.880
ENSPMRP00000006590	PNN	ENSPMRP00000006590	ENSPMRP00000013171	annotation not available	LOW QUALITY PROTEIN: pinin.	0.734
ENSPMRP00000006590	PRPF38A	ENSPMRP00000006590	ENSPMRP00000007926	annotation not available	pre-mRNA processing factor 38A.	0.490
ENSPMRP00000006590	RBM25	ENSPMRP00000006590	ENSPMRP00000006603	annotation not available	RNA-binding protein 25 isoform X1.	0.900
ENSPMRP00000006590	SNRNP48	ENSPMRP00000006590	ENSPMRP00000007525	annotation not available	U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1.	0.667
ENSPMRP00000006590	SRRM2	ENSPMRP00000006590	ENSPMRP00000032452	annotation not available	Serine/arginine repetitive matrix protein 2 isoform X1.	0.838
NCBP1	ENSPMRP00000006590	ENSPMRP00000033458	ENSPMRP00000006590	Nuclear cap-binding protein subunit 1 isoform X1.	annotation not available	0.921
NCBP1	NCMAP	ENSPMRP00000033458	ENSPMRP00000012629	Nuclear cap-binding protein subunit 1 isoform X1.	Noncompact myelin-associated protein isoform X1.	0.847
NCBP1	PNN	ENSPMRP00000033458	ENSPMRP00000013171	Nuclear cap-binding protein subunit 1 isoform X1.	LOW QUALITY PROTEIN: pinin.	0.462
NCBP1	PRPF38A	ENSPMRP00000033458	ENSPMRP00000007926	Nuclear cap-binding protein subunit 1 isoform X1.	pre-mRNA processing factor 38A.	0.728
NCBP1	RANBP2	ENSPMRP00000033458	ENSPMRP00000018464	Nuclear cap-binding protein subunit 1 isoform X1.	RanBP2-like and GRIP domain-containing protein 4 isoform X1.	0.970
NCBP1	RBM25	ENSPMRP00000033458	ENSPMRP00000006603	Nuclear cap-binding protein subunit 1 isoform X1.	RNA-binding protein 25 isoform X1.	0.904
NCBP1	UPF2	ENSPMRP00000033458	ENSPMRP00000017135	Nuclear cap-binding protein subunit 1 isoform X1.	Regulator of nonsense transcripts 2 isoform X1.	0.764
NCBP1	WBP11	ENSPMRP00000033458	ENSPMRP00000018270	Nuclear cap-binding protein subunit 1 isoform X1.	WW domain-binding protein 11.	0.632
NCMAP	ENSPMRP00000006590	ENSPMRP00000012629	ENSPMRP00000006590	Noncompact myelin-associated protein isoform X1.	annotation not available	0.880
NCMAP	NCBP1	ENSPMRP00000012629	ENSPMRP00000033458	Noncompact myelin-associated protein isoform X1.	Nuclear cap-binding protein subunit 1 isoform X1.	0.847
NCMAP	PNN	ENSPMRP00000012629	ENSPMRP00000013171	Noncompact myelin-associated protein isoform X1.	LOW QUALITY PROTEIN: pinin.	0.848
NCMAP	PRPF38A	ENSPMRP00000012629	ENSPMRP00000007926	Noncompact myelin-associated protein isoform X1.	pre-mRNA processing factor 38A.	0.857
NCMAP	RANBP2	ENSPMRP00000012629	ENSPMRP00000018464	Noncompact myelin-associated protein isoform X1.	RanBP2-like and GRIP domain-containing protein 4 isoform X1.	0.969