STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKP4Plakophilin-4 isoform X1. (1193 aa)    
Predicted Functional Partners:
JUP
Junction plakoglobin.
   
 0.738
CTNNB1
Catenin beta 1.
    
 0.737
CDH5
Cadherin 5, type 2, VE-cadherin.
    
 0.711
CDH17
Cadherin 17, LI cadherin.
    
 0.699
CTNNA1
Catenin alpha-1.
   
 0.695
ENSPMRP00000014511
annotation not available
   
 0.695
CTNNA2
Catenin alpha-2 isoform X1.
   
 0.695
CTNNA3
Catenin alpha 3.
   
 0.695
ZBTB33
Zinc finger and BTB domain-containing protein 33.
    
 
 0.636
RND2
Rho-related GTP-binding protein RhoN-like.
    
  0.604
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.