STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD47CD47 antigen (Rh-related antigen, integrin-associated signal transducer). (367 aa)    
Predicted Functional Partners:
THBS1
Thrombospondin 1.
   
 
 0.967
THBS4
Thrombospondin-4 isoform X1.
   
 
 0.952
ENSPMRP00000031123
LOW QUALITY PROTEIN: cartilage oligomeric matrix protein-like.
   
 
 0.952
THBS2
Thrombospondin 2/3/4/5.
   
 
 0.945
THBS3
LOW QUALITY PROTEIN: thrombospondin-3.
   
 
 0.940
ENSPMRP00000006695
annotation not available
   
 0.830
ENSPMRP00000006701
Tyrosine-protein phosphatase non-receptor type substrate 1-like isoform X1.
   
 0.830
LOC114599796
Signal-regulatory protein beta-1-like.
   
 0.830
LOC114599951
Signal-regulatory protein alpha/beta1/gamma.
   
 0.830
ENSPMRP00000006727
Signal-regulatory protein alpha/beta1/gamma.
   
 0.830
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.