STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMRP00000013487LOW QUALITY PROTEIN: ficolin-3-like. (177 aa)    
Predicted Functional Partners:
MASP1
Mannan-binding lectin serine protease 1 isoform X1.
    
 0.710
MASP2
Mannan-binding lectin serine protease 2.
    
 0.686
PLAU
Urokinase-type plasminogen activator.
    
 0.681
C1S
Complement component 1, s subcomponent.
    
 0.626
COLEC11
Collectin sub-family member 11.
   
 0.547
COLEC10
Collectin sub-family member 10.
    
 0.542
ENSPMRP00000015443
Teneurin-3-like.
 
   
 0.524
C1R
Complement component 1, r subcomponent.
    
 0.471
PTX3
Pentraxin-related protein PTX3.
    
 
 0.465
ENSPMRP00000013665
Urokinase plasminogen activator surface receptor-like.
   
 
  0.441
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.