STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARB2Lysosome membrane protein 2 isoform X1. (482 aa)    
Predicted Functional Partners:
CD63
CD63 antigen isoform X1.
     
 0.919
APOB
Apolipoprotein B-100.
    
 0.835
TLR4
LOW QUALITY PROTEIN: toll-like receptor 4.
   
 0.787
LOC114603328
Apolipoprotein A-I-like.
    
 0.739
VAMP7
Vesicle-associated membrane protein 7 isoform X1.
     
 0.712
DAB2
Disabled homolog 2 isoform X1.
   
 
 0.687
THBS1
Thrombospondin 1.
   
 
 0.679
CD47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer).
   
  
 0.656
LYN
Tyrosine-protein kinase Lyn isoform X1.
    
 
 0.645
LDLRAP1
Low density lipoprotein receptor adapter protein 1 isoform X1.
     
 0.639
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.