STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIEPeptidyl-prolyl isomerase E (cyclophilin E). (317 aa)    
Predicted Functional Partners:
PRPF19
Pre-mRNA-processing factor 19.
    
 0.999
XAB2
Pre-mRNA-splicing factor SYF1.
   
 0.999
AQR
LOW QUALITY PROTEIN: RNA helicase aquarius.
    
 0.995
CRNKL1
Crooked neck-like protein 1.
   
 0.994
BUD31
Bud site selection protein 31.
   
 0.994
SNW1
SNW domain-containing protein 1.
   
 0.993
RBM22
Pre-mRNA-splicing factor RBM22/SLT11.
   
 0.992
ISY1
Pre-mRNA-splicing factor ISY1 homolog.
   
  0.988
ZNF830
Zinc finger protein 830.
    
 0.987
SYF2
Pre-mRNA-splicing factor SYF2 isoform X1.
    
 0.985
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.