STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP3Receptor expression-enhancing protein 1/2/3/4. (275 aa)    
Predicted Functional Partners:
ATL2
Atlastin-2 isoform X1.
   
 
 0.667
ATL3
Atlastin-3 isoform X1.
   
 
 0.667
RAB3GAP2
Rab3 GTPase-activating protein non-catalytic subunit.
    
 
 0.642
RAB3GAP1
LOW QUALITY PROTEIN: rab3 GTPase-activating protein catalytic subunit.
    
 
 0.640
ARAF
A-Raf proto-oncogene, serine/threonine kinase.
   
  
 0.584
GOLGB1
Golgin subfamily B member 1 isoform X1.
    
 0.487
FIG4
Phosphatidylinositol 3,5-bisphosphate 5-phosphatase.
      
 0.435
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.