STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM4PR domain zinc finger protein 4 isoform X1. (808 aa)    
Predicted Functional Partners:
ENSPMRP00000036278
annotation not available
   
 0.623
LOC114607263
Tumor necrosis factor receptor superfamily member 16-like isoform X1.
     
 0.566
PRMT5
Protein arginine N-methyltransferase 5 isoform X1.
    
 
 0.561
SH3RF3
SH3 domain containing ring finger 3.
    
 0.538
HDAC3
Histone deacetylase 3.
    
 0.529
POLR3B
DNA-directed RNA polymerase III subunit RPC2.
   
 0.527
SMYD4
SET and MYND domain containing 4.
   
 0.487
VIPAS39
VPS33B-interacting protein in polarity and apical restriction.
      
 0.482
RPP38
Ribonucleases P/MRP protein subunit RPP38.
    
 0.461
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1.
    
  0.448
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.