STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRX1Iroquois homeobox 1. (513 aa)    
Predicted Functional Partners:
DLX2
Homeobox protein DLX-2.
    
 
 0.542
SRF
Serum response factor.
   
 
 0.512
HHEX
Hematopoietically-expressed homeobox protein HHEX.
   
 
 0.506
DLX1
Homeobox protein DLX1/4/6.
   
 
 0.462
PBX2
Pre-B-cell leukemia transcription factor 2 isoform X1.
    
 0.453
PBX1
Pre-B-cell leukemia transcription factor 1 isoform X1.
    
 0.453
PBX4
Pre-B-cell leukemia transcription factor 4 isoform X1.
    
 0.453
PBX3
Pre-B-cell leukemia transcription factor 3 isoform X1.
    
0.453
SMYD1
Histone-lysine N-methyltransferase SMYD1 isoform X1.
    
 0.407
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.