STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPGRIP1X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 isoform X1. (1252 aa)    
Predicted Functional Partners:
RPGR
LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator.
    
 
 0.963
NPHP4
Nephrocystin-4-like isoform X1.
    
 0.898
RCC1
Regulator of chromosome condensation.
    
 
 0.827
NEK8
NIMA (never in mitosis gene a)-related kinase 8.
    
 
 0.661
NPHP1
Nephrocystin-1 isoform X1.
    
 0.660
ENSPMRP00000028314
annotation not available
    
 0.622
CEP290
Centrosomal protein 290.
    
 0.610
WHRN
Whirlin isoform X1.
      
 0.585
FOXRED1
FAD-dependent oxidoreductase domain-containing protein 1 isoform X1.
      
 0.578
ACAA2
3-ketoacyl-CoA thiolase, mitochondrial.
    
 
 0.577
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.