STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALDH1A1Retinal dehydrogenase 1 isoform X1. (533 aa)    
Predicted Functional Partners:
BCO1
Beta,beta-carotene 15,15'-dioxygenase.
   
 
 0.945
ALDH1A3
Aldehyde dehydrogenase family 1 member A3.
  
  
 
0.938
ENSPMRP00000011563
Alcohol dehydrogenase 1A-like.
  
 0.935
LOC114591404
Alcohol dehydrogenase 1A-like isoform X1.
  
 0.935
LOC114603910
Alcohol dehydrogenase 1-like isoform X1.
  
 0.935
ADH4
Alcohol dehydrogenase 4-like.
  
 0.935
ADH5
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 0.935
CYP26A1
Cytochrome P450 family 26 subfamily A.
   
 
 0.934
CYP26B1
Cytochrome P450 family 26 subfamily B.
   
 
 0.932
SDR16C5
All-trans-retinol dehydrogenase (NAD+).
  
 0.927
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.