STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRCAPHelicase SRCAP isoform X1. (3376 aa)    
Predicted Functional Partners:
RUVBL1
RuvB-like protein 1 (pontin 52).
    
 0.971
RUVBL2
RuvB-like 2 isoform X1.
   
 0.971
ZNHIT1
Zinc finger HIT domain-containing protein 1 isoform X1.
    
 0.969
DMAP1
DNA methyltransferase 1-associated protein 1.
   
 0.968
VPS72
Vacuolar protein sorting-associated protein 72 homolog.
    
 0.963
ACTR6
Actin-related protein 6.
    
 0.956
CFDP1
Craniofacial development protein 1.
    
 0.945
TRRAP
Transformation/transcription domain-associated protein.
   
 0.929
ENSPMRP00000032516
annotation not available
    
 0.926
H2AZ2
H2A.Z variant histone 2.
    
 0.908
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.