STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN15LOW QUALITY PROTEIN: calpain-15. (1055 aa)    
Predicted Functional Partners:
CAPNS1
Calpain, small subunit 1.
   
 0.838
CAST
Calpastatin isoform X1.
   
 0.678
MAMLD1
Mastermind-like domain-containing protein 1 isoform X1.
    
 
 0.665
TFB2M
Dimethyladenosine transferase 2, mitochondrial.
      
 0.647
ITSN2
Intersectin-2 isoform X1.
   
 
  0.615
ZNF236
Zinc finger protein 236 isoform X1.
   
 0.593
LOC114587803
Suppressor of SWI4 1 homolog isoform X1.
      
 0.571
EFCAB7
EF-hand calcium-binding domain-containing protein 7 isoform X1.
   
 
 0.539
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.519
ENSPMRP00000012616
annotation not available
   
 0.516
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.