ENSPMRP00000023829 protein (Podarcis muralis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPMRP00000023829

annotation not available (592 aa)

Predicted Functional Partners:

ENSPMRP00000024699

0.474

ENSPMRP00000018516

0.467

ENSPMRP00000006884

0.458

ENSPMRP00000003810

0.452

ENSPMRP00000007155

0.446

ENSPMRP00000003291

0.443

ENSPMRP00000034276

0.443

ENSPMRP00000014923

0.434

ENSPMRP00000032939

0.431

ENSPMRP00000016183

0.420

Your Current Organism:

Podarcis muralis

NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSPMRP00000003291	ENSPMRP00000023829	annotation not available	annotation not available	0.443
ENSPMRP00000003810	ENSPMRP00000023829	annotation not available	annotation not available	0.452
ENSPMRP00000006884	ENSPMRP00000023829	annotation not available	annotation not available	0.458
ENSPMRP00000007155	ENSPMRP00000023829	annotation not available	annotation not available	0.446
ENSPMRP00000014923	ENSPMRP00000023829	annotation not available	annotation not available	0.434
ENSPMRP00000016183	ENSPMRP00000023829	annotation not available	annotation not available	0.420
ENSPMRP00000018516	ENSPMRP00000023829	annotation not available	annotation not available	0.467
ENSPMRP00000023829	ENSPMRP00000003291	annotation not available	annotation not available	0.443
ENSPMRP00000023829	ENSPMRP00000003810	annotation not available	annotation not available	0.452
ENSPMRP00000023829	ENSPMRP00000006884	annotation not available	annotation not available	0.458
ENSPMRP00000023829	ENSPMRP00000007155	annotation not available	annotation not available	0.446
ENSPMRP00000023829	ENSPMRP00000014923	annotation not available	annotation not available	0.434
ENSPMRP00000023829	ENSPMRP00000016183	annotation not available	annotation not available	0.420
ENSPMRP00000023829	ENSPMRP00000018516	annotation not available	annotation not available	0.467
ENSPMRP00000023829	ENSPMRP00000024699	annotation not available	annotation not available	0.474
ENSPMRP00000023829	ENSPMRP00000032939	annotation not available	annotation not available	0.431
ENSPMRP00000023829	ENSPMRP00000034276	annotation not available	annotation not available	0.443
ENSPMRP00000024699	ENSPMRP00000023829	annotation not available	annotation not available	0.474
ENSPMRP00000032939	ENSPMRP00000023829	annotation not available	annotation not available	0.431
ENSPMRP00000034276	ENSPMRP00000023829	annotation not available	annotation not available	0.443