STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC45Cell division cycle 45. (560 aa)    
Predicted Functional Partners:
GINS1
DNA replication complex GINS protein PSF1.
   
 0.999
WDHD1
LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding protein 1.
   
 0.999
MCM3
DNA replication licensing factor MCM3.
   
 0.999
MCM4
DNA replication licensing factor MCM4.
   
 0.999
MCM6
DNA replication licensing factor MCM6.
   
 0.999
MCM7
DNA replication licensing factor MCM7 isoform X1.
   
 0.999
MCM5
DNA replication licensing factor MCM5.
   
 0.999
MCM2
DNA replication licensing factor MCM2.
   
 0.999
GINS2
DNA replication complex GINS protein PSF2 isoform X1.
   
 0.999
TOPBP1
LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1.
   
 0.999
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.