STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMRP00000025639annotation not available (144 aa)    
Predicted Functional Partners:
COL4A4
LOW QUALITY PROTEIN: collagen alpha-4(IV) chain.
 
     0.772
C1QC
Complement C1q subcomponent subunit C.
  
  0.674
COL4A5
Collagen alpha-5(IV) chain.
 
     0.620
OTOL1
Otolin 1.
  
  
  0.555
C1QTNF2
Complement C1q tumor necrosis factor-related protein 2.
  
     0.530
C1QTNF7
Complement C1q tumor necrosis factor-related protein 7.
  
     0.530
COLEC10
Collectin sub-family member 10.
  
 
  0.529
COL26A1
Collagen type XXVI alpha 1 chain.
  
  
  0.518
ENSPMRP00000010904
annotation not available
  
 
  0.506
C1QB
LOW QUALITY PROTEIN: complement C1q subcomponent subunit B.
  
     0.479
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.