STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERCC4DNA excision repair protein ERCC-4. (907 aa)    
Predicted Functional Partners:
ERCC1
DNA excision repair protein ERCC-1 isoform X1.
   
 0.999
XPA
XPA, DNA damage recognition and repair factor.
    
 0.993
ENSPMRP00000024238
annotation not available
  
 0.990
MSH2
DNA mismatch repair protein MSH2.
    
 0.977
NARS1
Asparagine--tRNA ligase, cytoplasmic.
  
 0.961
MUS81
Crossover junction endonuclease MUS81 isoform X1.
    
 0.959
RPA1
Replication protein A1.
    
 0.955
FANCC
Fanconi anemia group C protein.
   
 0.954
ERCC3
General transcription and DNA repair factor IIH helicase subunit XPB.
  
 0.954
FAAP24
Fanconi anemia core complex-associated protein 24.
   
 0.954
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.