STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRPD1Small nuclear ribonucleoprotein Sm D1. (118 aa)    
Predicted Functional Partners:
PRPF19
Pre-mRNA-processing factor 19.
   
 0.999
CLNS1A
Chloride channel, nucleotide-sensitive, 1A.
   
 0.999
SNRPD2
Small nuclear ribonucleoprotein Sm D2.
   
 0.999
SNRPB
Small nuclear ribonucleoprotein-associated proteins B and B.
   
 0.999
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.999
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.999
SF3A3
Splicing factor 3A subunit 3.
   
 0.999
SNRPA1
U2 small nuclear ribonucleoprotein A.
   
 0.999
SPATA6L
Spermatogenesis associated 6-like protein isoform X1.
    
 0.999
CDC40
Pre-mRNA-processing factor 17 isoform X1.
    
 0.998
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.