STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF598E3 ubiquitin-protein ligase ZNF598. (886 aa)    
Predicted Functional Partners:
ASCC3
Activating signal cointegrator 1 complex subunit 3 isoform X1.
    
 
 0.739
GIGYF1
PERQ amino acid-rich with GYF domain-containing protein.
    
 
 0.689
RPS10
Small subunit ribosomal protein S10e.
    
 
 0.688
LTN1
E3 ubiquitin-protein ligase listerin.
    
 
 0.682
ERMN
Ermin.
      
 0.657
NEMF
Nuclear export mediator factor NEMF isoform X1.
      
 0.647
GCN1
EIF-2-alpha kinase activator GCN1 isoform X1.
    
 
 0.622
ASCC2
Activating signal cointegrator 1 complex subunit 2 isoform X1.
    
 
 0.608
OTUD4
OTU domain-containing protein 4-like isoform X1.
   
 
 0.601
U2AF2
Splicing factor U2AF 65 kDa subunit.
   
    0.596
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.