STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXA13Homeobox protein HoxA/C/D13. (317 aa)    
Predicted Functional Partners:
IHH
Indian hedgehog protein isoform X1.
   
  
 0.664
HOXA10
LOW QUALITY PROTEIN: homeobox protein Hox-A10.
   
  
0.475
MEIS1
Homeobox protein Meis1 isoform X1.
    
 
 0.439
MEIS2
Homeobox protein Meis2 isoform X1.
    
 
 0.439
PBX2
Pre-B-cell leukemia transcription factor 2 isoform X1.
    
 
 0.435
PBX1
Pre-B-cell leukemia transcription factor 1 isoform X1.
    
 
 0.435
PBX4
Pre-B-cell leukemia transcription factor 4 isoform X1.
    
 
 0.435
PBX3
Pre-B-cell leukemia transcription factor 3 isoform X1.
    
 
 0.435
HOXD10
Homeobox protein Hox-D10.
   
  
 0.431
IRX4
Iroquois-class homeodomain protein IRX-4.
  
 
 
 0.421
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.