STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACAD8LOW QUALITY PROTEIN: isobutyryl-CoA dehydrogenase, mitochondrial. (435 aa)    
Predicted Functional Partners:
EHHADH
Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase.
  
 0.960
HADHA
Enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase.
  
 0.959
ECHS1
Enoyl-CoA hydratase, mitochondrial.
  
 0.959
ETFA
Electron transfer flavoprotein subunit alpha, mitochondrial isoform X1.
 0.956
DBT
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase).
  
 0.943
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial isoform X1.
  
 0.894
ETFB
Electron transfer flavoprotein subunit beta isoform X1.
  
 0.881
TUBGCP6
Gamma-tubulin complex component 6.
   
 0.868
TUBGCP3
Gamma-tubulin complex component 3 isoform X1.
   
 0.868
ACAA2
3-ketoacyl-CoA thiolase, mitochondrial.
  
 0.804
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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