Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPMRP00000021363 | TRPT1 | ENSPMRP00000021363 | ENSPMRP00000027847 | annotation not available | tRNA phosphotransferase 1. | 0.581 |
HYI | TRPT1 | ENSPMRP00000017304 | ENSPMRP00000027847 | Putative hydroxypyruvate isomerase. | tRNA phosphotransferase 1. | 0.568 |
NUDT22 | TRPT1 | ENSPMRP00000027812 | ENSPMRP00000027847 | Uridine diphosphate glucose pyrophosphatase isoform X1. | tRNA phosphotransferase 1. | 0.677 |
RTCB | TRPT1 | ENSPMRP00000015406 | ENSPMRP00000027847 | TRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase). | tRNA phosphotransferase 1. | 0.687 |
RTCB | TSEN34 | ENSPMRP00000015406 | ENSPMRP00000032210 | TRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase). | tRNA splicing endonuclease subunit 34. | 0.638 |
THYN1 | TRPT1 | ENSPMRP00000027239 | ENSPMRP00000027847 | Thymocyte nuclear protein 1 isoform X1. | tRNA phosphotransferase 1. | 0.579 |
TRPT1 | ENSPMRP00000021363 | ENSPMRP00000027847 | ENSPMRP00000021363 | tRNA phosphotransferase 1. | annotation not available | 0.581 |
TRPT1 | HYI | ENSPMRP00000027847 | ENSPMRP00000017304 | tRNA phosphotransferase 1. | Putative hydroxypyruvate isomerase. | 0.568 |
TRPT1 | NUDT22 | ENSPMRP00000027847 | ENSPMRP00000027812 | tRNA phosphotransferase 1. | Uridine diphosphate glucose pyrophosphatase isoform X1. | 0.677 |
TRPT1 | RTCB | ENSPMRP00000027847 | ENSPMRP00000015406 | tRNA phosphotransferase 1. | TRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase). | 0.687 |
TRPT1 | THYN1 | ENSPMRP00000027847 | ENSPMRP00000027239 | tRNA phosphotransferase 1. | Thymocyte nuclear protein 1 isoform X1. | 0.579 |
TRPT1 | TSEN2 | ENSPMRP00000027847 | ENSPMRP00000019436 | tRNA phosphotransferase 1. | TRNA-splicing endonuclease subunit Sen2 isoform X1. | 0.614 |
TRPT1 | TSEN34 | ENSPMRP00000027847 | ENSPMRP00000032210 | tRNA phosphotransferase 1. | tRNA splicing endonuclease subunit 34. | 0.646 |
TRPT1 | TSEN54 | ENSPMRP00000027847 | ENSPMRP00000004079 | tRNA phosphotransferase 1. | tRNA splicing endonuclease subunit 54. | 0.600 |
TRPT1 | UTP11 | ENSPMRP00000027847 | ENSPMRP00000028813 | tRNA phosphotransferase 1. | Probable U3 small nucleolar RNA-associated protein 11. | 0.548 |
TRPT1 | XPOT | ENSPMRP00000027847 | ENSPMRP00000025518 | tRNA phosphotransferase 1. | Exportin-T. | 0.659 |
TSEN2 | TRPT1 | ENSPMRP00000019436 | ENSPMRP00000027847 | TRNA-splicing endonuclease subunit Sen2 isoform X1. | tRNA phosphotransferase 1. | 0.614 |
TSEN2 | TSEN34 | ENSPMRP00000019436 | ENSPMRP00000032210 | TRNA-splicing endonuclease subunit Sen2 isoform X1. | tRNA splicing endonuclease subunit 34. | 0.988 |
TSEN2 | TSEN54 | ENSPMRP00000019436 | ENSPMRP00000004079 | TRNA-splicing endonuclease subunit Sen2 isoform X1. | tRNA splicing endonuclease subunit 54. | 0.993 |
TSEN2 | XPOT | ENSPMRP00000019436 | ENSPMRP00000025518 | TRNA-splicing endonuclease subunit Sen2 isoform X1. | Exportin-T. | 0.424 |
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