STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA9Integrin alpha 9. (1094 aa)    
Predicted Functional Partners:
ITGB8
Integrin beta-8 isoform X1.
    
 0.983
ITGB3
Integrin beta 3.
   
 0.982
ITGB6
Integrin beta 6.
   
 0.981
ITGB5
Integrin beta 5.
   
 0.980
SPP1
Secreted phosphoprotein 1.
   
 0.975
ITGB7
Integrin beta-7 isoform X1.
   
 0.951
ITGB1
Integrin beta-1 isoform X1.
   
 0.951
VCAM1
Vascular cell adhesion molecule 1.
   
 0.950
PXN
Paxillin isoform X1.
    
 0.945
TNR
Tenascin-R.
    
 0.941
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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