STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THBS1Thrombospondin 1. (1176 aa)    
Predicted Functional Partners:
ITGB3
Integrin beta 3.
   
 0.973
SDC1
Syndecan 1.
    
 0.968
CD47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer).
   
 
 0.967
CD36
Platelet glycoprotein 4 isoform X1.
   
 0.967
ITGB1
Integrin beta-1 isoform X1.
   
 0.948
SDC4
Syndecan 4.
    
 0.916
SERPINF2
Alpha-2-antiplasmin isoform X1.
    
 0.871
FN1
LOW QUALITY PROTEIN: fibronectin.
   
 0.869
ITGA4
Integrin alpha 4.
   
 0.863
FGG
Fibrinogen gamma chain isoform X1.
    
 0.861
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.