STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LFNGBeta-1,3-N-acetylglucosaminyltransferase lunatic fringe. (378 aa)    
Predicted Functional Partners:
NOTCH1
Neurogenic locus notch homolog protein 1 isoform X1.
    
 0.921
MFNG
Beta-1,3-N-acetylglucosaminyltransferase manic fringe isoform X1.
  
  
 
0.902
NELFB
Negative elongation factor B.
   
 0.763
POLR2H
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1.
    
  0.660
A4GALT
Lactosylceramide 4-alpha-galactosyltransferase.
      
 0.657
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.610
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
    
  0.557
POLR2I
RNA polymerase II subunit I.
    
  0.555
SUPT5H
Transcription elongation factor SPT5 isoform X1.
    
 0.552
CHPF
Chondroitin sulfate synthase 2 isoform X1.
      
 0.552
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.