STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEBPACCAAT/enhancer binding protein (C/EBP), alpha. (137 aa)    
Predicted Functional Partners:
CDK3
Cyclin-dependent kinase 3 isoform X1.
    
 0.728
DDIT3
DNA damage-inducible transcript 3 protein isoform X1.
    
 0.643
CDK4
Cyclin-dependent kinase 4.
    
 0.585
CDK6
Cyclin-dependent kinase 6.
    
 0.585
ENSPMRP00000034195
annotation not available
    
 0.585
ENSPMRP00000014909
annotation not available
   
 0.574
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial isoform X1.
   
 0.574
E2F1
Transcription factor E2F1.
    
 0.572
PPARG
Peroxisome proliferator-activated receptor gamma isoform X1.
   
 0.551
UQCRB
Ubiquinol-cytochrome c reductase subunit 7.
   
 0.535
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.