STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX6Probable ATP-dependent RNA helicase DDX6. (483 aa)    
Predicted Functional Partners:
EDC3
Enhancer of mRNA-decapping protein 3 isoform X1.
   
 0.999
LSM1
U6 snRNA-associated Sm-like protein LSm1.
   
 0.998
DCP2
M7GpppN-mRNA hydrolase isoform X1.
   
 0.995
CNOT1
CCR4-NOT transcription complex subunit 1 isoform X1.
   
 0.994
EIF4ENIF1
Eukaryotic translation initiation factor 4E transporter isoform X1.
   
 0.993
CNOT4
CCR4-NOT transcription complex subunit 4 isoform X1.
    
 0.989
EDC4
Enhancer of mRNA-decapping protein 4 isoform X1.
   
 0.987
LSM14A
Protein LSM14 homolog A isoform X1.
   
 0.987
LSM14B
Protein LSM14 homolog B isoform X1.
   
 0.982
DCP1A
MRNA-decapping enzyme 1A isoform X1.
   
 0.979
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.