STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB5ARas-related protein Rab-5A. (242 aa)    
Predicted Functional Partners:
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3 isoform X1.
    
 0.968
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
   
 0.967
EEA1
Early endosome antigen 1 isoform X1.
    
 0.936
RAB5C
Ras-related protein Rab-5C.
  
  
 
0.903
RAB5B
Ras-related protein Rab-5B.
  
  
 
0.902
RBSN
Rabenosyn-5.
   
 0.886
APPL2
DCC-interacting protein 13-beta isoform X1.
   
 
 0.869
APPL1
DCC-interacting protein 13 alpha.
    
 
 0.868
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.816
GAPVD1
GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.
    
 0.786
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.