STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEBPECCAAT/enhancer binding protein (C/EBP), epsilon. (250 aa)    
Predicted Functional Partners:
CDK3
Cyclin-dependent kinase 3 isoform X1.
    
 0.728
CNOT3
CCR4-NOT transcription complex subunit 3.
      
 0.657
BCL7C
B-cell CLL/lymphoma 7 protein family member C.
      
 0.646
DDIT3
DNA damage-inducible transcript 3 protein isoform X1.
    
 0.643
CDK4
Cyclin-dependent kinase 4.
    
 0.585
CDK6
Cyclin-dependent kinase 6.
    
 0.585
ENSPMRP00000034195
annotation not available
    
 0.585
FBXL19
F-box and leucine-rich repeat protein 19.
    
 
 0.583
ENSPMRP00000014909
annotation not available
   
 0.574
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial isoform X1.
   
 0.574
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.