STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMD5FERM domain-containing protein 5 isoform X1. (243 aa)    
Predicted Functional Partners:
ENSPMRP00000023133
annotation not available
 
    
 0.900
ENSPMRP00000032780
annotation not available
 
      0.896
CASK
Calcium/calmodulin-dependent serine protein kinase.
   
 0.678
UBE3A
Ubiquitin-protein ligase E3 A.
    
 
 0.583
FBXO10
F-box only protein 10 isoform X1.
      
 0.555
PTPN2
Tyrosine-protein phosphatase non-receptor type 2 isoform X1.
 
    
 0.497
SNRPB
Small nuclear ribonucleoprotein-associated proteins B and B.
      
 0.485
NAA38
N-alpha-acetyltransferase 38, NatC auxiliary subunit.
      
 0.485
BTG4
Protein Tob/BTG.
      
 0.471
PTPN20
Tyrosine-protein phosphatase non-receptor type 20.
 
      0.454
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.