STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMOD1Tropomodulin-1 isoform X1. (358 aa)    
Predicted Functional Partners:
COPS3
COP9 signalosome complex subunit 3.
    
  0.718
EPB41L2
Band 4.1-like protein 2 isoform X1.
    
 0.712
COPS5
COP9 signalosome complex subunit 5.
    
 0.701
COPS7B
COP9 signalosome complex subunit 7b isoform X1.
    
  0.701
HSPA5
Endoplasmic reticulum chaperone BiP.
    
  0.701
DCAF1
DDB1- and CUL4-associated factor 1 isoform X1.
    
  0.699
NEB
Nebulin.
   
 0.697
COPS7A
COP9 signalosome complex subunit 7a.
    
  0.694
ATP5F1A
F-type H+-transporting ATPase subunit alpha.
    
  0.692
ADD1
Alpha-adducin isoform X1.
    
 
 0.683
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.