STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHC1Polyhomeotic-like protein 1 isoform X1. (1009 aa)    
Predicted Functional Partners:
CBX8
Chromobox protein homolog 8.
    
 0.912
CBX2
Chromobox 2.
    
 0.908
CBX7
Chromobox protein homolog 7.
    
 0.890
CBX4
E3 SUMO-protein ligase CBX4.
    
 0.874
CBX6
Chromobox protein homolog 6 isoform X1.
    
 0.871
PCGF6
Polycomb group RING finger protein 6 isoform X1.
    
 0.781
PCGF5
Polycomb group RING finger protein 5 isoform X1.
    
 0.769
BCOR
BCL-6 corepressor isoform X1.
  
 
  0.764
PCGF1
Polycomb group RING finger protein 1.
    
 0.758
PCGF3
Polycomb group RING finger protein 3 isoform X1.
    
 0.753
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.