Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMI1 | CBX4 | ENSPMRP00000021727 | ENSPMRP00000003194 | Polycomb group RING finger protein 4. | E3 SUMO-protein ligase CBX4. | 0.907 |
BMI1 | CBX8 | ENSPMRP00000021727 | ENSPMRP00000003209 | Polycomb group RING finger protein 4. | Chromobox protein homolog 8. | 0.955 |
BMI1 | ENSPMRP00000000647 | ENSPMRP00000021727 | ENSPMRP00000000647 | Polycomb group RING finger protein 4. | Alpha-2-macroglobulin-like isoform X1. | 0.535 |
BMI1 | ENSPMRP00000034247 | ENSPMRP00000021727 | ENSPMRP00000034247 | Polycomb group RING finger protein 4. | annotation not available | 0.535 |
BMI1 | ENSPMRP00000034338 | ENSPMRP00000021727 | ENSPMRP00000034338 | Polycomb group RING finger protein 4. | annotation not available | 0.535 |
BMI1 | ENSPMRP00000034353 | ENSPMRP00000021727 | ENSPMRP00000034353 | Polycomb group RING finger protein 4. | Pregnancy zone protein. | 0.535 |
BMI1 | RING1 | ENSPMRP00000021727 | ENSPMRP00000001542 | Polycomb group RING finger protein 4. | E3 ubiquitin-protein ligase RNF1/2. | 0.924 |
BMI1 | RNF2 | ENSPMRP00000021727 | ENSPMRP00000009278 | Polycomb group RING finger protein 4. | E3 ubiquitin-protein ligase RNF1/2. | 0.924 |
CBX4 | BMI1 | ENSPMRP00000003194 | ENSPMRP00000021727 | E3 SUMO-protein ligase CBX4. | Polycomb group RING finger protein 4. | 0.907 |
CBX4 | CBX8 | ENSPMRP00000003194 | ENSPMRP00000003209 | E3 SUMO-protein ligase CBX4. | Chromobox protein homolog 8. | 0.971 |
CBX4 | ENSPMRP00000000647 | ENSPMRP00000003194 | ENSPMRP00000000647 | E3 SUMO-protein ligase CBX4. | Alpha-2-macroglobulin-like isoform X1. | 0.540 |
CBX4 | ENSPMRP00000034247 | ENSPMRP00000003194 | ENSPMRP00000034247 | E3 SUMO-protein ligase CBX4. | annotation not available | 0.540 |
CBX4 | ENSPMRP00000034338 | ENSPMRP00000003194 | ENSPMRP00000034338 | E3 SUMO-protein ligase CBX4. | annotation not available | 0.540 |
CBX4 | ENSPMRP00000034353 | ENSPMRP00000003194 | ENSPMRP00000034353 | E3 SUMO-protein ligase CBX4. | Pregnancy zone protein. | 0.540 |
CBX4 | PCGF2 | ENSPMRP00000003194 | ENSPMRP00000022335 | E3 SUMO-protein ligase CBX4. | Polycomb group ring finger 2. | 0.907 |
CBX4 | RING1 | ENSPMRP00000003194 | ENSPMRP00000001542 | E3 SUMO-protein ligase CBX4. | E3 ubiquitin-protein ligase RNF1/2. | 0.901 |
CBX4 | RNF2 | ENSPMRP00000003194 | ENSPMRP00000009278 | E3 SUMO-protein ligase CBX4. | E3 ubiquitin-protein ligase RNF1/2. | 0.901 |
CBX8 | BMI1 | ENSPMRP00000003209 | ENSPMRP00000021727 | Chromobox protein homolog 8. | Polycomb group RING finger protein 4. | 0.955 |
CBX8 | CBX4 | ENSPMRP00000003209 | ENSPMRP00000003194 | Chromobox protein homolog 8. | E3 SUMO-protein ligase CBX4. | 0.971 |
CBX8 | ENSPMRP00000000647 | ENSPMRP00000003209 | ENSPMRP00000000647 | Chromobox protein homolog 8. | Alpha-2-macroglobulin-like isoform X1. | 0.633 |
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