STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBDSRibosome maturation protein SBDS. (250 aa)    
Predicted Functional Partners:
EFL1
Elongation factor-like GTPase 1.
  
 
 0.973
ENSPMRP00000020511
annotation not available
   
 
 0.845
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
   
 
 0.845
ENSPMRP00000000853
annotation not available
   
 0.817
RPS19
Small subunit ribosomal protein S19e.
   
 
 0.817
RPLP0
Large subunit ribosomal protein LP0.
   
 0.817
RPL24
Large subunit ribosomal protein L24e.
  
 
 0.816
RPL5
Large subunit ribosomal protein L5e.
   
 
 0.809
RPSA
Small subunit ribosomal protein SAe.
   
 
 0.803
RPL11
Large subunit ribosomal protein L11e.
   
 
 0.798
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.