STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALNT6Polypeptide N-acetylgalactosaminyltransferase 6. (654 aa)    
Predicted Functional Partners:
GCNT1
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase.
     
 0.926
LOC114586421
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like.
     
 0.759
C1GALT1C1
C1GALT1-specific chaperone 1.
     
 0.758
FGF23
Fibroblast growth factor 23.
     
 0.756
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.756
FAIM2
Protein lifeguard 2.
   
  
 0.663
LOC114593000
Keratin, type II cytoskeletal 5-like.
      
 0.640
SCN4A
Sodium channel protein type 4 subunit alpha isoform X1.
      
 0.489
SCN8A
Sodium channel protein type 8 subunit alpha isoform X1.
      
 0.487
DIS3
Exosome complex exonuclease DIS3/RRP44.
      
 0.487
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.