STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC3H2RING finger and CCCH-type zinc finger domain-containing protein. (1205 aa)    
Predicted Functional Partners:
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
   0.744
CNOT1
CCR4-NOT transcription complex subunit 1 isoform X1.
   
 
 0.743
TRIP12
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12.
   
    0.712
RC3H1
RING finger and CCCH-type zinc finger domain-containing protein.
  
 
  
0.673
HELZ
Probable helicase with zinc finger domain isoform X1.
   
 
 0.671
ATXN2L
Ataxin-2-like protein isoform X1.
   
 
 0.634
LTN1
E3 ubiquitin-protein ligase listerin.
   
  
 0.630
AFF4
AF4/FMR2 family member 4.
   
 
 0.615
XRN1
5'-3' exoribonuclease 1.
   
 
 0.611
CNOT2
CCR4-NOT transcription complex subunit 2 isoform X1.
    
 
 0.598
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.