STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCO2LOW QUALITY PROTEIN: beta,beta-carotene 9',10'-oxygenase. (494 aa)    
Predicted Functional Partners:
MYO9B
Myosin IXB.
   
 0.639
ALDH18A1
LOW QUALITY PROTEIN: delta-1-pyrroline-5-carboxylate synthase.
      
 0.638
MYO9A
LOW QUALITY PROTEIN: unconventional myosin-IXa.
   
 0.630
RARS1
Arginine--tRNA ligase, cytoplasmic.
      
 0.579
ANLN
Actin-binding protein anillin.
   
 
 0.574
STARD3
StAR-related lipid transfer protein 3.
      
 0.570
LOC114585330
6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase.
 
    
 0.567
PIBF1
Progesterone-induced-blocking factor 1 isoform X1.
      
 0.565
KBTBD12
Kelch repeat and BTB domain-containing protein 12.
   
  
 0.560
LOC114585688
6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase.
 
    
 0.554
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.