STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRM316S rRNA (guanosine(1370)-2'-O)-methyltransferase. (360 aa)    
Predicted Functional Partners:
MALSU1
Mitochondrial assembly of ribosomal large subunit protein 1.
   
 
 0.985
MRPL13
39S ribosomal protein L13, mitochondrial.
  
 
 0.930
MRPL3
39S ribosomal protein L3, mitochondrial.
   
 
 0.925
MRPL17
39S ribosomal protein L17, mitochondrial.
  
 
 0.924
MRPL21
Mitochondrial ribosomal protein L21.
   
   0.918
MTG1
Mitochondrial ribosome-associated GTPase 1 isoform X1.
  
 
 0.917
MRPL11
39S ribosomal protein L11, mitochondrial.
   
 
 0.917
DDX28
Probable ATP-dependent RNA helicase DDX28.
  
 
 0.915
GTPBP3
TRNA modification GTPase GTPBP3, mitochondrial.
   
 
 0.914
GTPBP8
GTP-binding protein 8 isoform X1.
  
 
 0.911
Your Current Organism:
Podarcis muralis
NCBI taxonomy Id: 64176
Other names: Common wall lizard, Lacerrta muralis, Mauereidechse, P. muralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.