Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HA49_08030Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)    
Predicted Functional Partners:
HA49_00290
Enterobacterial common antigen polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
HA49_00295
4-alpha-L-fucosyltransferase; Catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
HA49_01360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
HA49_13490
DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
HA49_00310
TDP-fucosamine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
HA49_12800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
HA49_13170
Highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0263 family.
  
     0.766
HA49_10125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.765
HA49_01825
ATP F0F1 synthase subunit I; Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.763
HA49_08130
Gene expression modulator; With Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
Your Current Organism:
Tatumella morbirosei
NCBI taxonomy Id: 642227
Other names: LMG 23360, LMG:23360, NCPPB 4036, T. morbirosei, Tatumella morbirosei Brady et al. 2010, strain BD 878, strain CMC6
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.