Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HA49_16640Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (678 aa)    
Predicted Functional Partners:
lacZ
beta-D-galactosidase; Forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.944
HA49_16635
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.898
araA
Sugar isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
  
  0.880
galM
Galactose-1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.824
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
   0.663
HA49_16630
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.641
HA49_22760
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
HA49_15530
alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
     0.547
HA49_05915
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.540
HA49_16645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.510
Your Current Organism:
Tatumella morbirosei
NCBI taxonomy Id: 642227
Other names: LMG 23360, LMG:23360, NCPPB 4036, T. morbirosei, Tatumella morbirosei Brady et al. 2010, strain BD 878, strain CMC6
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.