STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ81948.1PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: ckr:CKR_2078 hypothetical protein. (748 aa)    
Predicted Functional Partners:
ADZ81949.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: cbe:Cbei_0262 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
  
 0.937
ADZ81947.1
KEGG: aoe:Clos_1269 secretion protein HlyD family protein.
  
    0.794
ADZ81815.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: cpy:Cphy_2590 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
  
 0.767
ADZ81946.1
Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: toc:Toce_1519 regulatory protein TetR.
       0.539
ADZ81950.1
KEGG: cbh:CLC_2168 MerR family transcriptional regulator; PFAM: Bacterial transcription activator, effector binding; HTH transcriptional regulator, MerR; SMART: Bacterial transcription activator, effector binding; HTH transcriptional regulator, MerR.
       0.491
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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