STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ82291.1alpha-L-arabinofuranosidase domain protein; KEGG: bpb:bpr_I0329 alpha-L-arabinofuranosidase Arf51A; PFAM: Alpha-L-arabinofuranosidase, C-terminal; SMART: Alpha-L-arabinofuranosidase, C-terminal. (499 aa)    
Predicted Functional Partners:
ADZ85625.1
Alpha-N-arabinofuranosidase; PFAM: Glycoside hydrolase, family 43; Cellulose-binding domain, family II, bacterial type; Carbohydrate binding domain, family 6; Ricin B lectin; KEGG: cac:CA_P0120 xylan degradation protein; SMART: Cellulose-binding domain, family II, bacterial type; Ricin B lectin.
 
 
 0.968
ADZ83008.1
Xylan 1,4-beta-xylosidase; KEGG: cce:Ccel_1011 glycoside hydrolase family 43; PFAM: Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.951
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.941
ADZ82292.1
KEGG: ere:EUBREC_2456 hypothetical protein.
 
     0.890
uxaC
KEGG: eel:EUBELI_00905 glucuronate isomerase; PFAM: Uronate isomerase.
     
 0.831
ADZ82340.1
Alpha-galactosidase; KEGG: ttm:Tthe_2424 glycoside hydrolase family 4; PFAM: Glycoside hydrolase, family 4; Glycosyl hydrolase, family 4, C-terminal.
     
 0.800
ADZ85649.1
Alpha-galactosidase; KEGG: ttm:Tthe_2424 glycoside hydrolase family 4; PFAM: Glycoside hydrolase, family 4; Glycosyl hydrolase, family 4, C-terminal.
     
 0.800
ADZ82012.1
PFAM: Protein of unknown function DUF1680; KEGG: gyc:GYMC61_2720 protein of unknown function DUF1680.
 
   
 0.798
ADZ82294.1
Alpha-glucuronidase; KEGG: ttm:Tthe_0979 alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle; Glycosyl hydrolase 67, C-terminal.
 
   
 0.758
ADZ82265.1
Alpha-N-arabinofuranosidase; KEGG: cce:Ccel_3438 glycoside hydrolase family 43; PFAM: Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.734
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.