STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ82293.1KEGG: gym:GYMC10_3281 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain. (265 aa)    
Predicted Functional Partners:
ADZ85054.1
KEGG: efa:EF0432 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
  
     0.769
ADZ84846.1
KEGG: ccb:Clocel_2618 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
  
     0.756
ADZ81921.1
Transcriptional regulator, AraC family; KEGG: cbe:Cbei_4501 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
  
     0.741
ADZ84964.1
Transcription activator effector binding protein; KEGG: cpy:Cphy_3174 AraC family transcriptional regulator; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding; Helix-turn-helix, AraC type, DNA binding domain.
  
     0.672
ADZ85568.1
KEGG: elm:ELI_3009 AraC family transcription regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
  
     0.658
ADZ82301.1
KEGG: csh:Closa_3410 transcriptional regulator, AraC family; PFAM: Bacterial transcription activator, effector binding; HTH transcriptional regulator, AraC; SMART: Bacterial transcription activator, effector binding; Helix-turn-helix, AraC type, DNA binding domain.
  
     0.565
ADZ82294.1
Alpha-glucuronidase; KEGG: ttm:Tthe_0979 alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle; Glycosyl hydrolase 67, C-terminal.
       0.535
ADZ82121.1
KEGG: gym:GYMC10_5001 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
  
     0.487
ADZ82295.1
Beta-glucosidase; KEGG: cbe:Cbei_4974 glycoside hydrolase family 3 protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal.
       0.473
ADZ82298.1
PFAM: Polysaccharide deacetylase; KEGG: cce:Ccel_0146 polysaccharide deacetylase.
 
     0.454
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.