STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ82368.1Cyclase family protein; PFAM: Putative cyclase; KEGG: cpy:Cphy_1756 cyclase family protein. (191 aa)    
Predicted Functional Partners:
ADZ83520.1
PFAM: Endoglucanase H/Glycosyl hydrolase family 26; KEGG: toc:Toce_0165 copper amine oxidase domain protein.
  
     0.707
ADZ85458.1
S-layer domain-containing protein; PFAM: S-layer homology domain; KEGG: aoe:Clos_2601 S-layer domain-containing protein.
  
     0.630
ADZ85506.1
Hypothetical protein; KEGG: cth:Cthe_1932 S-layer-like domain-containing protein.
  
     0.614
ADZ84759.1
PFAM: Two component regulator three Y; KEGG: dau:Daud_0847 copper amine oxidase domain-containing protein.
  
     0.586
ADZ85508.1
PFAM: Protein of unknown function DUF1934; KEGG: cst:CLOST_0935 hypothetical protein.
  
     0.582
ADZ83805.1
KEGG: csh:Closa_2047 hypothetical protein.
  
     0.577
ADZ85810.1
PEGA domain protein; PFAM: PEGA; KEGG: eel:EUBELI_00078 hypothetical protein.
  
     0.560
ADZ83663.1
CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.
  
     0.557
ADZ82367.1
KEGG: cpf:CPF_2828 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein; PFAM: Multi antimicrobial extrusion protein.
  
    0.549
ADZ82770.1
KEGG: cpy:Cphy_3851 hypothetical protein.
  
     0.546
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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