Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADZ82636.1 | ADZ82637.1 | Clole_0903 | Clole_0904 | Hypothetical protein. | Hypothetical protein. | 0.689 |
ADZ82636.1 | ADZ82638.1 | Clole_0903 | Clole_0905 | Hypothetical protein. | KEGG: cbe:Cbei_4013 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; SMART: HTH transcriptional regulator, GntR. | 0.433 |
ADZ82637.1 | ADZ82636.1 | Clole_0904 | Clole_0903 | Hypothetical protein. | Hypothetical protein. | 0.689 |
ADZ82637.1 | ADZ82638.1 | Clole_0904 | Clole_0905 | Hypothetical protein. | KEGG: cbe:Cbei_4013 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; SMART: HTH transcriptional regulator, GntR. | 0.478 |
ADZ82638.1 | ADZ82636.1 | Clole_0905 | Clole_0903 | KEGG: cbe:Cbei_4013 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; SMART: HTH transcriptional regulator, GntR. | Hypothetical protein. | 0.433 |
ADZ82638.1 | ADZ82637.1 | Clole_0905 | Clole_0904 | KEGG: cbe:Cbei_4013 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; SMART: HTH transcriptional regulator, GntR. | Hypothetical protein. | 0.478 |
ADZ82638.1 | ADZ82639.1 | Clole_0905 | Clole_0906 | KEGG: cbe:Cbei_4013 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; SMART: HTH transcriptional regulator, GntR. | KEGG: csc:Csac_1271 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain. | 0.499 |
ADZ82639.1 | ADZ82638.1 | Clole_0906 | Clole_0905 | KEGG: csc:Csac_1271 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain. | KEGG: cbe:Cbei_4013 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; SMART: HTH transcriptional regulator, GntR. | 0.499 |