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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ82965.1ABC-type transporter, periplasmic subunit family 3; KEGG: csh:Closa_3953 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3. (280 aa)    
Predicted Functional Partners:
ADZ82967.1
KEGG: csh:Closa_3951 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 0.995
ADZ82966.1
KEGG: csh:Closa_3952 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 0.993
ADZ82964.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: cbe:Cbei_4173 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 0.983
ADZ85815.1
KEGG: cbe:Cbei_1050 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.820
ADZ82614.1
KEGG: ccb:Clocel_3470 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.808
ADZ82613.1
KEGG: ccb:Clocel_3471 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.799
ADZ85158.1
KEGG: fnu:FN0802 amino acid ABC transporter permease; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.793
ADZ85154.1
KEGG: amt:Amet_3660 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.774
ADZ82615.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: ccb:Clocel_3469 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.771
ADZ85157.1
Phosphate-transporting ATPase; PFAM: ABC transporter-like; KEGG: tpd:Teth39_1763 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.770
Your Current Organism:
Cellulosilyticum lentocellum
NCBI taxonomy Id: 642492
Other names: C. lentocellum DSM 5427, Cellulosilyticum lentocellum DSM 5427, Clostridium lentocellum ATCC 49066, Clostridium lentocellum DSM 5427, Clostridium lentocellum str. DSM 5427, Clostridium lentocellum strain DSM 5427
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